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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4789934_4790036_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4789934 - 4790036

Intron Length:

103

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTA|GTGAGTATA

5'SS Class:

major

3'SS Sequence:

TTTTTTCCTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

AATCTGAGAAAA

Flanking Amino Acid:

KYKEQIEFGITSEKLLFAWK

Intron Amino Acid Position:

504

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.6

0.63

0.9

78.7

29.9

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

90.2

0.9

0.6

89.9

18.2

Minor 5ss

35.7

-1.6

2.9

38.6

Minor BPS

37.3

-0.9

2.1

47.8

34.8

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589