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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4790099_4791094_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4790099 - 4791094

Intron Length:

996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTACGTATC

5'SS Class:

major

3'SS Sequence:

GCCCTGCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

CTCTGCTTATGT

Flanking Amino Acid:

MEQAVELCGREDDVDQLVKK

Intron Amino Acid Position:

525

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.45

1.1

70.1

40.8

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

0.52

0.9

68.5

37.4

Minor 5ss

40.5

-1.1

50.6

40.1

Minor BPS

46.9

-0.1

2.3

66.83

49.8

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589