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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4791205_4791464_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4791205 - 4791464

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGAGTTGA

5'SS Class:

major

3'SS Sequence:

CTTTTTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGAGAA

U12 Branch Point Sequence:

TCTAGAGAAATT

Flanking Amino Acid:

GRKQGGILEDLEEQARELYR

Intron Amino Acid Position:

561

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.4

0.51

65.8

Major BPS

48.8

-0

1.1

44.7

38.7

Major PPT

87.7

0.85

0.6

81.2

30.8

Minor 5ss

36.7

-1.5

2.9

43.6

Minor BPS

36.2

-0.9

2.5

56.97

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589