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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4791515_4792066_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4791515 - 4792066

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGAC

5'SS Class:

strong_major

3'SS Sequence:

CTGACTATTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

TTCTGTGTAATA

Flanking Amino Acid:

LYRRLREKPRDQRTSGDSQE

Intron Amino Acid Position:

578

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

29.5

Major BPS

77.8

0.69

78.2

31.8

Major PPT

72.1

0.5

62.3

Minor 5ss

32.3

-2

3.3

42.9

44.7

Minor BPS

48.1

-0.1

2.3

66.01

41.8

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589