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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4792496_4792680_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4792496 - 4792680

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

TGTTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATGAT

U12 Branch Point Sequence:

GCAGTCTGAATC

Flanking Amino Acid:

ELWNLLKIACSKVRGPVTGS

Intron Amino Acid Position:

661

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

76.2

34.7

Major BPS

0.45

57.8

Major PPT

90.7

0.92

0.7

88.9

28.1

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

48.6

-0.1

1.5

52.09

39.4

Associated Gene:

Gene:

IKBKB

Ensembl Gene ID:

ENSAPLG00000006379

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023659

4782670 - 4793739

11070

ENSAPLT00000006682

4782670 - 4794258

11589