Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_4796169_4797071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4796169 - 4797071

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAG

U12 Branch Point Sequence:

ATGGCAGTGATT

Flanking Amino Acid:

YQLDEKTSIVAKVNNASLIG

Intron Amino Acid Position:

248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.8

80.5

34.9

Major BPS

72.4

0.56

1.5

71.4

45.1

Major PPT

89.2

0.88

0.6

Minor 5ss

42.1

-0.9

2.9

55.5

43.9

Minor BPS

43.1

-0.4

2.3

61.72

42.8

Associated Gene:

Gene:

VDAC3

Ensembl Gene ID:

ENSAPLG00000006503

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006778

4795766 - 4804771

9006