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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4810263_4811709_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4810263 - 4811709

Intron Length:

1447

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

TACCTTCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

CTTTCTTTACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

89.6

24.1

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

77.7

0.62

0.8

32.3

Minor 5ss

46.3

-0.4

2.8

64.1

41.5

Minor BPS

0.8

1.6

87.23

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006803

4807030 - 4813994

6965