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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4811797_4812516_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4811797 - 4812516

Intron Length:

720

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTTTGTTCCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAGTAAT

U12 Branch Point Sequence:

TGTGAAGTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.8

80.1

28.5

Major BPS

67.8

0.44

1.1

67.7

36.5

Major PPT

76.6

0.6

0.9

69.4

41.7

Minor 5ss

45.4

-0.5

2.7

60.6

44.5

Minor BPS

43.6

-0.4

2.4

66.74

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006803

4807030 - 4813994

6965