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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4813199_4813942_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

4813199 - 4813942

Intron Length:

744

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

ATTCTATACTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TATTCTATACTC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

81.6

33.2

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

73.1

0.52

0.9

70.9

38.5

Minor 5ss

55.3

0.18

2.7

73.8

36.4

Minor BPS

52.9

0.07

1.9

68.14

37.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006545

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006803

4807030 - 4813994

6965