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Intron Name: Anas_platyrhynchos_platyrhynchos_23_4960_5549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4960 - 5549

Intron Length:

590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

TCCCCTTACCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTTAC

U12 Branch Point Sequence:

TTCCCCTTACCC

Flanking Amino Acid:

PKGDQAELEVLPGAAAEDLV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

75.2

40.6

Major BPS

56.6

0.16

1.1

48.9

36.2

Major PPT

71.9

0.49

0.9

64.7

35.4

Minor 5ss

36.8

-1.5

3.5

53.4

44.8

Minor BPS

67.6

0.53

1.7

75.92

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035409

859 - 6674

5816