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Intron Name: Anas_platyrhynchos_platyrhynchos_23_504945_511086_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

504945 - 511086

Intron Length:

6142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTCCA

5'SS Class:

strong_major

3'SS Sequence:

CATTTGATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTACACTGAATA

Flanking Amino Acid:

SPRKWYSPIKGKLDALWVLL

Intron Amino Acid Position:

452

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

71.6

40.2

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

76.9

0.61

39.8

Minor 5ss

33.1

-1.9

3.1

41.9

44.7

Minor BPS

56.2

0.19

1.6

68.29

37.3

Associated Gene:

Gene:

ANTXR1

Ensembl Gene ID:

ENSAPLG00000016232

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046534

486826 - 602416

115591

ENSAPLT00000016938

456530 - 602416

145887