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Intron Name: Anas_platyrhynchos_platyrhynchos_23_511255_511435_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

511255 - 511435

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTTCCCCACCT

Flanking Amino Acid:

RGVGGIKRMEVRWGEKGSTE

Intron Amino Acid Position:

396

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.1

41.1

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

0.76

0.8

81.1

35.5

Minor 5ss

34.5

-1.8

2.8

42.5

44.3

Minor BPS

56.1

0.27

2.2

85.27

40.9

Associated Gene:

Gene:

ANTXR1

Ensembl Gene ID:

ENSAPLG00000016232

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046534

486826 - 602416

115591

ENSAPLT00000016938

456530 - 602416

145887