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Intron Name: Anas_platyrhynchos_platyrhynchos_23_550948_564358_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

550948 - 564358

Intron Length:

13411

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGCTGT

5'SS Class:

major

3'SS Sequence:

CTGTTTTTCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTCT

U12 Branch Point Sequence:

TCTCTCTTTCTC

Flanking Amino Acid:

SFRINDTVTLNEKPFVVEDT

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

1.1

63.8

43.3

Major BPS

33.2

-1

4.2

59.6

46.8

Major PPT

0.74

0.8

76.2

37.8

Minor 5ss

47.8

-0.2

2.9

70.2

41.2

Minor BPS

39.2

-0.8

3.5

58.92

40.6

Associated Gene:

Gene:

ANTXR1

Ensembl Gene ID:

ENSAPLG00000016232

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046534

486826 - 602416

115591

ENSAPLT00000044904

537410 - 602416

65007

ENSAPLT00000040948

542915 - 602416

59502

ENSAPLT00000016938

456530 - 602416

145887