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Intron Name: Anas_platyrhynchos_platyrhynchos_23_618081_618794_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

618081 - 618794

Intron Length:

714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ATTAACTCATCA

Flanking Amino Acid:

QQDLSNLGNQGSQVWYNPAS

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

76.2

39.9

Major BPS

81.9

0.79

0.8

81.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

35.9

-1.6

3.3

40.9

45.3

Minor BPS

47.7

-0.1

64.43

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016229

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016929

617779 - 622513

4735