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Intron Name: Anas_platyrhynchos_platyrhynchos_23_687429_691519_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
687429 - 691519

Intron Length:
4091

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAAAGGGG

5'SS Class:
major

3'SS Sequence:
GTCCTTTTCCTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAC

U12 Branch Point Sequence:
CCTCCTTTAACT

Flanking Amino Acid:
IRRVLGSASGAVFGQRLAET

Intron Amino Acid Position:
155

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.5
0.65
1
61.1
43.7

Major BPS
77.3
0.68
1
79.3
29.4

Major PPT
75.5
0.57
0.8
68.7
37.2

Minor 5ss
28
-2.5
3.5
37.8
47.1

Minor BPS
73.9
0.83
1.3
80.9
41.2

Associated Gene:

Gene:
ARHGAP25

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

678128 - 699413
21286