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Intron Name: Anas_platyrhynchos_platyrhynchos_23_707691_708307_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

707691 - 708307

Intron Length:

617

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGACA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTCAGTGTAATC

Flanking Amino Acid:

SGFKRAFKIKDFANTIPGHG

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

77.5

32.3

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

0.61

0.9

76.9

37.3

Minor 5ss

27.1

-2.6

2.9

31.6

42.4

Minor BPS

44.3

-0.4

2.3

57.9

Associated Gene:

Gene:

CDS2

Ensembl Gene ID:

ENSAPLG00000016097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033050

705483 - 718511

13029

ENSAPLT00000020406

704622 - 727149

22528

ENSAPLT00000045477

706045 - 850736

144692

ENSAPLT00000016800

702553 - 727149

24597

ENSAPLT00000041653

702840 - 727149

24310

ENSAPLT00000039434

706045 - 715285

9241