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Intron Name: Anas_platyrhynchos_platyrhynchos_23_709687_710012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

709687 - 710012

Intron Length:

326

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTAAT

5'SS Class:

major

3'SS Sequence:

CTTCCTCTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTAATTATCC

Flanking Amino Acid:

FFFGRTPLIKLSPKKTWEGF

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

80.8

32.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

76.1

0.59

0.9

72.7

Minor 5ss

39.8

-1.1

2.5

51.4

45.2

Minor BPS

50.5

-0

68.72

42.4

Associated Gene:

Gene:

CDS2

Ensembl Gene ID:

ENSAPLG00000016097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016800

702553 - 727149

24597

ENSAPLT00000041653

702840 - 727149

24310

ENSAPLT00000039434

706045 - 715285

9241

ENSAPLT00000033050

705483 - 718511

13029

ENSAPLT00000020406

704622 - 727149

22528

ENSAPLT00000045477

706045 - 850736

144692