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Intron Name: Anas_platyrhynchos_platyrhynchos_23_710101_711371_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

710101 - 711371

Intron Length:

1271

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

TTCGCCCATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

TACTTGCCAACA

Flanking Amino Acid:

IIHNLFEGMIWFIVPISCVI

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

35.7

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

67.6

0.4

0.9

59.2

37.3

Minor 5ss

35.2

-1.7

2.8

40.6

40.8

Minor BPS

42.3

-0.5

2.4

56.98

42.3

Associated Gene:

Gene:

CDS2

Ensembl Gene ID:

ENSAPLG00000016097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016800

702553 - 727149

24597

ENSAPLT00000041653

702840 - 727149

24310

ENSAPLT00000039434

706045 - 715285

9241

ENSAPLT00000033050

705483 - 718511

13029

ENSAPLT00000020406

704622 - 727149

22528

ENSAPLT00000045477

706045 - 850736

144692