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Intron Name: Anas_platyrhynchos_platyrhynchos_23_712842_713612_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

712842 - 713612

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

GCATTCTCCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TTCCTGCTAATG

Flanking Amino Acid:

YDLPWFRTLSWYFLLCVNYF

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

70.5

41.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

71.5

0.48

0.9

64.8

36.3

Minor 5ss

29.8

-2.3

2.6

30.3

36.7

Minor BPS

43.4

-0.6

2.3

52.59

42.7

Associated Gene:

Gene:

CDS2

Ensembl Gene ID:

ENSAPLG00000016097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039434

706045 - 715285

9241

ENSAPLT00000033050

705483 - 718511

13029

ENSAPLT00000020406

704622 - 727149

22528

ENSAPLT00000045477

706045 - 850736

144692

ENSAPLT00000016800

702553 - 727149

24597

ENSAPLT00000041653

702840 - 727149

24310