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Intron Name: Anas_platyrhynchos_platyrhynchos_23_727166_848650_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

727166 - 848650

Intron Length:

121485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGCCGTGG

5'SS Class:

weak_major

3'SS Sequence:

GCAGCAGCGGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCAGCAG

U12 Branch Point Sequence:

GGAGCGGCAGCA

Flanking Amino Acid:

LQACGWGSSSGSGSRSMSEL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.5

0.01

1.2

39.4

43.3

Major BPS

33.8

-1

1.5

33.4

42.7

Major PPT

48.8

-0

1.1

39.4

39.1

Minor 5ss

34.7

-1.7

3.4

37.8

Minor BPS

30.5

-1.4

2.4

37.93

40.3

Associated Gene:

Gene:

CDS2

Ensembl Gene ID:

ENSAPLG00000016097

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045477

706045 - 850736

144692