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Intron Name: Anas_platyrhynchos_platyrhynchos_23_79368_80242_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79368 - 80242

Intron Length:

875

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

AATGACTGCACAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

CTCTCAATGACT

Flanking Amino Acid:

LNKTKAAADVGISSETILKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.8

83.5

Major BPS

71.4

0.53

67.3

39.3

Major PPT

58.4

0.19

1.1

50.2

42.8

Minor 5ss

40.3

-1.1

3.1

56.2

42.2

Minor BPS

51.6

0.13

73.42

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006815

77267 - 83752

6486