Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_800402_800534_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

800402 - 800534

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAACGTAT

5'SS Class:

major

3'SS Sequence:

TTTTTTAATTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

VLGALFCTLFGMITAVGLSN

Intron Amino Acid Position:

288

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.2

68.3

39.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

82.9

0.74

0.8

83.1

32.2

Minor 5ss

44.1

-0.6

3.3

60.9

46.1

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

SLC23A2

Ensembl Gene ID:

ENSAPLG00000015862

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034978

781942 - 802348

20407

ENSAPLT00000016597

778465 - 802348

23884