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Intron Name: Anas_platyrhynchos_platyrhynchos_23_81192_81571_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81192 - 81571

Intron Length:

380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGAGCT

5'SS Class:

strong_major

3'SS Sequence:

ACCCCTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTTAT

U12 Branch Point Sequence:

CTTTACGTAACC

Flanking Amino Acid:

HTDGRHERPGGDATVTISHR

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

72.5

37.3

Major BPS

71.3

0.53

61.3

Major PPT

78.3

0.64

0.8

72.2

31.7

Minor 5ss

31.7

-2.1

3.6

47.8

47.9

Minor BPS

58.1

0.24

2.2

75.23

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006539

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006815

77267 - 83752

6486