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Intron Name: Anas_platyrhynchos_platyrhynchos_23_834629_834780_F


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
834629 - 834780

Intron Length:
152

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
AAG|GCAAGTTGG

5'SS Class:
strong_major

3'SS Sequence:
CATCTGTGCTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTACAT

U12 Branch Point Sequence:
GCTTCTTTACAT

Flanking Amino Acid:
VLKLLLNKFKIENSAEEFAL

Intron Amino Acid Position:
268

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
97.1
1.11
0.8
73.8
42.8

Major BPS
82.7
0.81
0.9
89.3
26.1

Major PPT
67.4
0.39
1
64.7
41

Minor 5ss
29.3
-2.4
3.8
40.6
45.6

Minor BPS
58.4
0.34
1.7
73.53
43.4

Associated Gene:

Gene:
RASSF2

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

825686 - 840474
14789

815894 - 839036
23143