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Intron Name: Anas_platyrhynchos_platyrhynchos_23_865949_866044_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

865949 - 866044

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTTAC

U12 Branch Point Sequence:

GCCTCCTCACTT

Flanking Amino Acid:

AQYLHWVGHTLREDVASCQP

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

75.4

34.5

Major BPS

77.8

0.69

0.9

69.4

37.3

Major PPT

94.5

0.6

29.4

Minor 5ss

33.5

-1.9

3.1

42.4

44.3

Minor BPS

49.4

0.04

1.9

64.4

46.3

Associated Gene:

Gene:

PROM2

Ensembl Gene ID:

ENSAPLG00000015738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016407

864739 - 871427

6689