Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_23_866957_867029_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

866957 - 867029

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAT

U12 Branch Point Sequence:

CTGTCCTCATCC

Flanking Amino Acid:

RSLEGLQKMQRNGTVAGRLA

Intron Amino Acid Position:

640

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.4

0.98

0.8

81.3

32.8

Major BPS

82.3

0.8

0.9

81.8

30.8

Major PPT

79.9

0.67

0.8

73.8

31.3

Minor 5ss

-2.4

3.2

40.6

45.6

Minor BPS

55.2

0.14

1.9

66.38

45.2

Associated Gene:

Gene:

PROM2

Ensembl Gene ID:

ENSAPLG00000015738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016407

864739 - 871427

6689