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Intron Name: Anas_platyrhynchos_platyrhynchos_23_867102_867220_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

867102 - 867220

Intron Length:

119

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TATCTTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATGAAT

U12 Branch Point Sequence:

AGACTATGAATC

Flanking Amino Acid:

EVDYGRFQEEMKIPVVQTSL

Intron Amino Acid Position:

616

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

66.8

0.42

1.4

75.9

36.3

Major PPT

82.6

0.73

0.8

74.1

36.3

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

45.1

-0.3

1.6

50.25

32.8

Associated Gene:

Gene:

PROM2

Ensembl Gene ID:

ENSAPLG00000015738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016407

864739 - 871427

6689