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Intron Name: Anas_platyrhynchos_platyrhynchos_23_868385_868670_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

868385 - 868670

Intron Length:

286

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGT|GTAAGCATC

5'SS Class:

major

3'SS Sequence:

CTCCCTCTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAG

U12 Branch Point Sequence:

GCTGTCAGCAGT

Flanking Amino Acid:

RGEAGAKFLMVGVGLGFLFS

Intron Amino Acid Position:

466

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.48

1.1

69.1

41.9

Major BPS

49.4

-0

1.7

60.7

45.9

Major PPT

82.8

0.74

0.7

25.3

Minor 5ss

45.9

-0.4

2.9

42.6

Minor BPS

35.3

-1

2.1

49.41

Associated Gene:

Gene:

PROM2

Ensembl Gene ID:

ENSAPLG00000015738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016407

864739 - 871427

6689