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Intron Name: Anas_platyrhynchos_platyrhynchos_23_869696_869799_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

869696 - 869799

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGGCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAGAAC

U12 Branch Point Sequence:

TTTCTCTTTAAG

Flanking Amino Acid:

ALADLKDRAGDLQTSLHHLQ

Intron Amino Acid Position:

249

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

66.1

45.1

Major BPS

48.1

-0.1

1.4

37.3

Major PPT

78.9

0.65

83.2

25.7

Minor 5ss

40.5

-1.1

3.3

55.3

48.9

Minor BPS

54.5

-0

1.8

65.94

41.3

Associated Gene:

Gene:

PROM2

Ensembl Gene ID:

ENSAPLG00000015738

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016407

864739 - 871427

6689