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Intron Name: Anas_platyrhynchos_platyrhynchos_23_873585_874049_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

873585 - 874049

Intron Length:

465

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TCCTCCCCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATGTTCTGATTT

Flanking Amino Acid:

YGQAWNQQGFNQTQSSAAWM

Intron Amino Acid Position:

343

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

83.3

27.9

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

79.3

0.66

0.7

72.6

25.8

Minor 5ss

34.6

-1.7

2.8

44.2

Minor BPS

52.7

0.16

1.7

70.6

40.9

Associated Gene:

Gene:

TIA1

Ensembl Gene ID:

ENSAPLG00000009953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045041

872461 - 887373

14913

ENSAPLT00000010394

872461 - 887373

14913