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Intron Name: Anas_platyrhynchos_platyrhynchos_23_87575_88404_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

87575 - 88404

Intron Length:

830

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCACC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTGGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTTAC

U12 Branch Point Sequence:

AAATGCTTACCT

Flanking Amino Acid:

SSPNGSDLDRSITLHLKISC

Intron Amino Acid Position:

1085

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.9

78.8

35.5

Major BPS

66.4

0.41

1.1

57.4

41.4

Major PPT

71.3

0.48

68.9

Minor 5ss

40.6

-1

2.8

52.8

44.1

Minor BPS

0.21

72.54

43.9

Associated Gene:

Gene:

SLC4A5

Ensembl Gene ID:

ENSAPLG00000007031

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007368

85668 - 113226

27559