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Intron Name: Anas_platyrhynchos_platyrhynchos_23_877506_881066_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

877506 - 881066

Intron Length:

3561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTGCTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAA

U12 Branch Point Sequence:

AGGTGCTAAACT

Flanking Amino Acid:

KAAFAPFGRISDARVVKDMA

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.7

0.54

1.3

74.1

36.5

Major BPS

70.1

0.5

1.1

69.9

35.3

Major PPT

74.9

0.56

78.8

33.5

Minor 5ss

37.5

-1.4

2.7

46.4

36.1

Minor BPS

51.7

0.13

2.1

70.85

45.9

Associated Gene:

Gene:

TIA1

Ensembl Gene ID:

ENSAPLG00000009953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045041

872461 - 887373

14913

ENSAPLT00000010394

872461 - 887373

14913