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Intron Name: Anas_platyrhynchos_platyrhynchos_23_883374_883791_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

883374 - 883791

Intron Length:

418

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGAGCC

5'SS Class:

major

3'SS Sequence:

TCTTTTCTACCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTTTTCTACCA

Flanking Amino Acid:

PCKNCKMIMDTAGNDPYCFV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

34.1

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

83.6

0.76

0.8

78.1

35.1

Minor 5ss

34.1

-1.8

3.4

47.8

41.1

Minor BPS

49.8

-0

1.9

66.77

40.3

Associated Gene:

Gene:

TIA1

Ensembl Gene ID:

ENSAPLG00000009953

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045041

872461 - 887373

14913

ENSAPLT00000010394

872461 - 887373

14913