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Intron Name: Anas_platyrhynchos_platyrhynchos_23_888432_888872_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

888432 - 888872

Intron Length:

441

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TGA|GCGAGGGCA

5'SS Class:

weak_major

3'SS Sequence:

CATGTGGGTGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

ACGGCCTCAACC

Flanking Amino Acid:

HMKHFVKELGETSWTSSCGK

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.3

61.3

34.3

Major BPS

67.6

0.44

1.2

Major PPT

45.7

-0.2

1.8

45.8

45.5

Minor 5ss

-4

3.7

17.1

30.1

Minor BPS

55.3

0.15

1.7

60.73

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026556

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019813

887913 - 888909

997