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Intron Name: Anas_platyrhynchos_platyrhynchos_23_97775_98086_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
97775 - 98086

Intron Length:
312

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCAAGTCC

5'SS Class:
major

3'SS Sequence:
GATCTGTCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTGAT

U12 Branch Point Sequence:
ACCACCATAAAC

Flanking Amino Acid:
LLGDATDNYQGVMESFLGTA

Intron Amino Acid Position:
529

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
65.2
0.36
1.3
60.8
39.1

Major BPS
78.6
0.71
1.2
71.4
45.1

Major PPT
68
0.4
1
58
42.8

Minor 5ss
32.8
-2
3.2
42.8
44.3

Minor BPS
48.5
-0.1
1.8
55.92
41.9

Associated Gene:

Gene:
SLC4A5

Ensembl Gene ID:

Chromosome:
23

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

85668 - 113226
27559