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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1083606_1085807_F

Intron Information:

Intron Rank:

130255

Intron Class:

major

Intron Phase:

Intron Coordinates:

1083606 - 1085807

Intron Length:

2202

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTATG

5'SS Class:

strong_major

3'SS Sequence:

GACTTTTATTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CATTCTAAGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

83.8

34.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

64.4

0.32

1.1

68.2

41.4

Minor 5ss

41.8

-0.9

2.8

56.1

41.3

Minor BPS

48.1

-0

68.5

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034839

1083349 - 1087114

3766