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Intron Name: Anas_platyrhynchos_platyrhynchos_24_109986_112711_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

109986 - 112711

Intron Length:

2726

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

GTGCTTTCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

ACATCTTCATTG

Flanking Amino Acid:

RRTSRRKRAKVEYREMDESL

Intron Amino Acid Position:

100

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

1.1

66.1

40.1

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

78.8

0.65

0.9

72.5

37.8

Minor 5ss

32.4

-2

3.4

39.3

44.5

Minor BPS

45.6

-0.4

1.8

46.4

Associated Gene:

Gene:

KDM1A

Ensembl Gene ID:

ENSAPLG00000011113

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011622

107218 - 162302

55085