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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1389575_1392154_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1389575 - 1392154

Intron Length:

2580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTTCA

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTGGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TTCTTCTTCCCT

Flanking Amino Acid:

KNVQLYESKLKIEPRSPTCS

Intron Amino Acid Position:

2200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.8

79.4

29.6

Major BPS

71.2

0.53

37.5

Major PPT

70.1

0.45

64.8

41.3

Minor 5ss

40.6

-1

2.7

47.5

42.3

Minor BPS

44.7

-0.3

3.6

78.66

44.1

Associated Gene:

Gene:

HIVEP3

Ensembl Gene ID:

ENSAPLG00000030198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030685

1387977 - 1480742

92766

ENSAPLT00000019880

1388681 - 1522451

133771