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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1393216_1400273_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1393216 - 1400273

Intron Length:

7058

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAATTC

5'SS Class:

strong_major

3'SS Sequence:

CCCATCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTTAT

U12 Branch Point Sequence:

TGTCTTATATTT

Flanking Amino Acid:

SSLVDLEAEEGTSEDLFQDS

Intron Amino Acid Position:

1846

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

78.4

30.1

Major BPS

73.7

0.59

1.2

65.7

43.2

Major PPT

75.2

0.57

0.8

68.6

31.7

Minor 5ss

41.9

-0.9

3.2

45.7

Minor BPS

46.8

-0.1

1.8

66.46

38.6

Associated Gene:

Gene:

HIVEP3

Ensembl Gene ID:

ENSAPLG00000030198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030685

1387977 - 1480742

92766

ENSAPLT00000019880

1388681 - 1522451

133771