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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1400373_1409128_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1400373 - 1409128

Intron Length:

8756

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAC

U12 Branch Point Sequence:

TTGACCAAAATA

Flanking Amino Acid:

KYCNFAFKTKGNLTKHMKSK

Intron Amino Acid Position:

1813

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.9

0.96

0.8

78.6

28.9

Major BPS

78.7

0.71

0.9

69.3

37.7

Major PPT

83.9

0.76

0.8

Minor 5ss

30.7

-2.2

3.3

40.8

45.7

Minor BPS

-0

64.88

41.8

Associated Gene:

Gene:

HIVEP3

Ensembl Gene ID:

ENSAPLG00000030198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030685

1387977 - 1480742

92766

ENSAPLT00000019880

1388681 - 1522451

133771