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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1409305_1442251_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1409305 - 1442251

Intron Length:

32947

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGCTCATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATCA

Flanking Amino Acid:

EPVRIKIFEGGYKSNEEYVY

Intron Amino Acid Position:

1754

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

79.6

34.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.5

0.46

0.9

64.8

36.5

Minor 5ss

36.8

-1.5

3.3

44.3

43.6

Minor BPS

71.9

0.68

1.5

82.41

32.7

Associated Gene:

Gene:

HIVEP3

Ensembl Gene ID:

ENSAPLG00000030198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030685

1387977 - 1480742

92766

ENSAPLT00000019880

1388681 - 1522451

133771