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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1442398_1446509_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1442398 - 1446509

Intron Length:

4112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGCAA

5'SS Class:

major

3'SS Sequence:

TTTGGGGAGATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAATCAA

U12 Branch Point Sequence:

TAATCAATGATT

Flanking Amino Acid:

SSSRKPKMTEVHLPSLLSNE

Intron Amino Acid Position:

1706

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

67.7

Major BPS

71.2

0.53

72.3

32.8

Major PPT

51.6

0.04

1.2

46.5

45.2

Minor 5ss

30.1

-2.3

3.2

38.5

46.5

Minor BPS

49.6

0.05

1.9

71.25

39.2

Associated Gene:

Gene:

HIVEP3

Ensembl Gene ID:

ENSAPLG00000030198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030685

1387977 - 1480742

92766

ENSAPLT00000019880

1388681 - 1522451

133771