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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1452168_1456944_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

1452168 - 1456944

Intron Length:

4777

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAAT

5'SS Class:

major

3'SS Sequence:

GATGTAATTACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTCTCTTGGATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.6

0.65

1.1

80.4

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

68.2

0.41

1.1

59.1

Minor 5ss

40.3

-1.1

2.9

61.3

Minor BPS

56.6

0.06

1.5

62.52

40.2

Associated Gene:

Gene:

HIVEP3

Ensembl Gene ID:

ENSAPLG00000030198

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030685

1387977 - 1480742

92766

ENSAPLT00000019880

1388681 - 1522451

133771