Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_24_1757216_1757666_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1757216 - 1757666

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTCACCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

ATCTTCTCACCC

Flanking Amino Acid:

IPGVEKELYKLPGFCEGSGS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.1

75.3

40.8

Major BPS

0.87

0.8

85.6

Major PPT

73.1

0.52

0.8

65.7

30.1

Minor 5ss

42.4

-0.8

2.9

60.3

Minor BPS

51.5

0.03

1.8

64.27

41.6

Associated Gene:

Gene:

SERINC2

Ensembl Gene ID:

ENSAPLG00000010195

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030250

1754530 - 1761735

7206