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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1800008_1801155_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1800008 - 1801155

Intron Length:

1148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CACTGTTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCAAAC

U12 Branch Point Sequence:

GCAGCTTCAAAC

Flanking Amino Acid:

NTVCKKCGCKGHFAKECFMQ

Intron Amino Acid Position:

132

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

89.6

24.2

Major BPS

67.4

0.43

73.2

28.9

Major PPT

78.5

0.64

0.9

72.2

37.5

Minor 5ss

57.8

0.27

2.3

75.5

40.6

Minor BPS

45.9

-0.3

1.7

49.32

40.7

Associated Gene:

Gene:

ZCCHC17

Ensembl Gene ID:

ENSAPLG00000021781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047229

1790054 - 1806046

15993