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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1801257_1801669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1801257 - 1801669

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAGGTAAA

5'SS Class:

major

3'SS Sequence:

CTTCTCTCTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGCAAT

U12 Branch Point Sequence:

TGGATTGCAATT

Flanking Amino Acid:

KDLDPNNVALDQDERKKRMF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.1

0.43

1.1

67.9

39.2

Major BPS

61.8

0.29

1.4

70.7

42.6

Major PPT

85.1

0.79

0.7

77.1

31.6

Minor 5ss

34.9

-1.7

37.8

41.2

Minor BPS

41.8

-0.5

56.63

40.7

Associated Gene:

Gene:

ZCCHC17

Ensembl Gene ID:

ENSAPLG00000021781

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047229

1790054 - 1806046

15993