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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1812878_1814522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1812878 - 1814522

Intron Length:

1645

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCCACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGCTTCTGAAAC

Flanking Amino Acid:

VMELHYNTDGSMLFSASTDK

Intron Amino Acid Position:

122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

82.1

0.8

71.6

36.4

Major PPT

84.5

0.78

0.7

25.6

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

57.1

0.2

1.6

65.07

40.1

Associated Gene:

Gene:

SNRNP40

Ensembl Gene ID:

ENSAPLG00000009767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044309

1811174 - 1821228

10055

ENSAPLT00000010221

1811174 - 1823007

11834