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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1814689_1815189_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1814689 - 1815189

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CGTGTCTCTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTATAACC

Flanking Amino Acid:

CTGSDDGTVKLWDIRKKAAV

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

1.2

76.2

39.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

73.2

0.52

0.9

70.1

36.5

Minor 5ss

31.7

-2.1

3.1

40.6

45.6

Minor BPS

66.5

0.5

1.5

77.19

Associated Gene:

Gene:

SNRNP40

Ensembl Gene ID:

ENSAPLG00000009767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044309

1811174 - 1821228

10055

ENSAPLT00000010221

1811174 - 1823007

11834