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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1816469_1817216_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1816469 - 1817216

Intron Length:

748

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACATCCT

5'SS Class:

major

3'SS Sequence:

CTCTCTGTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAC

U12 Branch Point Sequence:

ATCCAGCTAATT

Flanking Amino Acid:

YLLSNAMDNTVRIWDVRPFA

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

68.9

41.9

Major BPS

0.42

1.1

38.5

Major PPT

81.2

0.7

0.8

75.8

32.7

Minor 5ss

35.1

-1.7

3.2

51.3

45.1

Minor BPS

41.8

-0.5

2.3

61.53

42.3

Associated Gene:

Gene:

SNRNP40

Ensembl Gene ID:

ENSAPLG00000009767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044309

1811174 - 1821228

10055

ENSAPLT00000010221

1811174 - 1823007

11834