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Intron Name: Anas_platyrhynchos_platyrhynchos_24_1817791_1821071_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1817791 - 1821071

Intron Length:

3281

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTTAT

5'SS Class:

strong_major

3'SS Sequence:

GACTCTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

GCTCTCATAATG

Flanking Amino Acid:

GSKIAGGSADRFVYVWDTTS

Intron Amino Acid Position:

307

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.7

1.03

0.7

89.2

17.7

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

72.1

0.5

0.9

65.9

35.5

Minor 5ss

36.4

-1.5

2.9

48.7

47.5

Minor BPS

49.5

-0.1

1.7

54.07

41.1

Associated Gene:

Gene:

SNRNP40

Ensembl Gene ID:

ENSAPLG00000009767

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044309

1811174 - 1821228

10055

ENSAPLT00000010221

1811174 - 1823007

11834